< Master index Index for eidors/deprecated >

Index for eidors/deprecated

Matlab files in this directory:

 GN_abs_solveGN_ABS_SOLVER absolute solver using Gauss Newton approximation
 aa_calc_jacobianAA_CALC_JACOBIAN: J= aa_calc_jacobian( fwd_model, img)
 aa_calc_system_matAA_CALC_SYSTEM_MAT: SS= aa_calc_system_mat( fwd_model, img)
 aa_e_move_image_priorAA_E_MOVE_IMAGE_PRIOR calculate image prior
 aa_e_move_jacobianAA_E_MOVE_JACOBIAN: J= aa_e_move_jacobian( fwd_model, img)
 aa_fwd_parametersAA_FWD_PARAMETERS: data= aa_fwd_solve( fwd_model, image)
 aa_fwd_solveAA_FWD_SOLVE: data= aa_fwd_solve( fwd_model, img)
 aa_inv_conj_gradAA_INV_CONJ_GRAD inverse solver based on the CG
 aa_inv_solveAA_INV_SOLVE inverse solver using approach of Adler&Guardo 1996
 aa_system_mat_fieldsAA_SYSTEM_MAT_FIELDS: fields (elem to nodes) fraction of system mat
 ab_calc_tv_priorAB_PRIOR_TV calculate Total Variation image prior
 ab_tv_diff_solveAB_TV_DIFF_SOLVE inverse solver for Andrea Borsic's
 ab_tv_lagged_diffAB_TV_LAGGED_DIFF Lagged Diffusivity Inverse Solver
 backproj_solveBACKPROJ_SOLVE inverse solver using backprojection
 bld_masterfunction [Ef,D,Ela] = bld_master(vtx,simp,mat_ref);
 bld_master_fullfunction [Ef,D,Ela] = bld_master_full(vtx,simp,mat,elec,zc);
 calc_covar_priorCALC_COVAR_PRIOR image prior with distance-based interelement covar
 calc_move_jacobianCALC_MOVE_JACOBIAN Computes the Jacobian matrix for conductivity and
 calc_noise_paramsparams = GREIT_noise_params(imdl, homg_voltage, sig_voltage)
 center_of_simpsCENTER_OF_SIMPS: Calculates the Center of Mass of the Simplicies.
 edge_refined_elem_mapperEDGE_REFINED_ELEM_MAPPER: map elements from coarse to dense model
 edge_refined_node_mapperEDGE_REFINED_NODE_MAPPER:
 eidors_model_paramsmdl = eidors_model_params( mdl );
 elems_in_cylinderINCYL: calculate elements in infinite cylinder
 exponential_covar_priorEXPONENTIAL_COVAR_PRIOR image prior with exponential
 fem_master_fullfunction [E,D,Ela,pp] = fem_master_full(vtx,simp,mat,gnd_ind,elec,zc,perm_sym);
 filter_jacobianFILTER_JACOBIAN: J= filter_jacobian( fwd_model, img)
 forward_solver[V] = forward_solver(E,I,tol,pp,V);
 fourD_prior_solvefourD_prior_solve-- inverse solver to account for temporal
 gaussian_HPF_priorGAUSSIAN_HPF_PRIOR calculate image prior
 gaussian_prior_likelyhoodParameters for image
 get_3d_measGET_3D_MEAS: extracts multiplane voltage measurements from a calculated
 get_multi_measfunction [voltage,ind,df] = get_multi_meas(protocol,elec,V,I,vtx,no_pl);
 integrofgradfunction [IntGrad] = integrofgrad(vtx,simp,mat_ref);
 inv_kalman_diffINV_KALMAN_DIFF inverse solver for difference EIT
 inv_solve_dual_meshINV_SOLVE_DUAL_MESH using a coarse and fine mesh
 inverse_solverfunction [solf,solp] = inverse_solver(I,voltage,tol,mat_ref,vtx,simp,elec,no_pl,zc,perm_sym,gnd_ind,tfac,Reg,it);
 iso_f_smoothfunction [Reg] = iso_f_smooth(simp,vtx,deg,w);
 iso_s_smoothfunction [Reg] = iso_s_smooth(simp,vtx,deg,w);
 jacobian_3dfunction [J] = jacobian_3d(I,elec,vtx,simp,gnd_ind,mat_ref,zc,v_f,df,tol,perm_sym);
 jacobian_3d_fields[J] = jacobian_3d_fields(V,Ela,D,elec,vtx,simp,mat_ref,v_f,df, c2f);
 jacobian_3d_with_fieldsJACOBIAN_3D_WITH_FIELDS: calculate jacobian_3d, but accept V fields as
 laplace_image_priorLAPLACE_IMAGE_PRIOR calculate image prior
 m_3d_fieldsfunction [v_f] = m_3d_fields(vtx,el_no,m_ind,E,tol,gnd_ind,v_f);
 manchester_tomographyExample to show reconstructions from
 mapper_nodes_elemsMAPPER_ELEMS_NODES: calculates mapping function taking elems to nodes
 mcmc_solveNP_INV_SOLVE inverse solver for Nick Polydorides EIDORS3D code
 noser_image_priorNOSER_IMAGE_PRIOR calculate image prior
 np_calc_3d_fieldsNP_CALC_3D_FIELDS: J= np_calc_3d_fields( fwd_model, img)
 np_calc_image_priorNP_CALC_IMAGE_PRIOR calculate image prior
 np_calc_jacobianNP_CALC_JACOBIAN: J= np_calc_jacobian( fwd_model, img)
 np_calc_system_matNP_CALC_SYSTEM_MAT: s_mat= np_calc_system_mat( fwd_model, img)
 np_fwd_parametersNP_FWD_PARAMETERS: data= np_fwd_solve( fwd_model )
 np_fwd_solveNP_FWD_SOLVE: data= np_fwd_solve( fwd_model, img)
 np_inv_solveNP_INV_SOLVE inverse solver for Nick Polydorides EIDORS3D code
 pdipm_absPDIPM_ABS inverse solver for absolute data using Primal/Dual interior point method
 pdipm_diffPDIPM_DIFF inverse solver for difference data using Primal/Dual interior point method
 perturb_jacobianPERTURB_JACOBIAN: J= perturb_jacobian( fwd_model, img)
 ref_masterfunction [Er] = ref_master(E,vtx,gnd_ind,sch);
 set_3d_currentsfunction [I,Ib]=set_3d_currents(protocol,elec,vtx,gnd_ind,no_pl);
 set_fwd_modelSET_FWD_MODEL: create EIDORS v3 fwd_model from v2 parameters
 set_multi_currentsfunction [I,Ib] = set_multi_currents(protocol,elec,vtx,gnd_ind,no_pl);
 tikhonov_image_priorTIKHONOV_IMAGE_PRIOR calculate image prior
 time_prior_solveTIME_PRIOR_SOLVE inverse solver to account for time differences
 time_smooth_priorTIME_SMOOTH_PRIOR calculate image prior

Other Matlab-specific files in this directory:


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