 GREIT_desired_img_FEMmesh | GREIT_DESIRED_IMG_FEMmesh GREIT onto a FEM mesh |
| GREIT_desired_img_original | GREIT_DESIRED_IMG_ORIGINAL The original desired solution for GREIT |
| GREIT_desired_img_sigmoid | GREIT_DESIRED_IMG_SIGMOID sigmoid-decay desired image function for GREIT |
| RtR_prior_elem2nodes | RtR_PRIOR_ELEM2NODES: Convert elem to nodal RtR Image Prior |
| TV_operator_2D | 03/12/00 By Andrea Borsic |
| TV_operator_3D | L=TV_operator_3D( msh ) |
| calc_GREIT_RM | CALCULATE GREIT reconstruction matrix |
| calc_TSVD_RM | CALC_TSVD_RM: Calculated truncated Jacobian SVD reconstruction matrix |
| calc_image_SNR | % CALC_IMAGE_SNR: Calculates the signal-to-noise ratio (SNR) in the image |
| calc_lambda_regtools | % CALC_LAMBDA_REGTOOLS: Find optimal hyperparameter by the L-curve (LCC) |
| calc_noise_figure | CALC_NOISE_FIGURE: calculate the noise amplification (NF) of an algorithm |
| calc_reciproc_error | CALC_RECIPROC_ERROR: CALCULATE RECIPROCITY ERROR MATRIX |
| calc_solution_error | CALC_SOLUTION_ERROR Calculate residuals for a solution |
| choose_image_SNR | % CHOOSE_IMAGE_SNR: choose hyperparameter based on image SNR calculation |
| choose_noise_figure | CHOOSE_NOISE_FIGURE: choose hyperparameter based on NF calculation |
| get_RM | % GET_RM: obtains the reconstruction matrix from a given inverse model |
| inv_solve_TSVD | INV_SOLVE_TSVD: inverse solver based on truncatated SVD |
| inv_solve_TV_irls | INV_SOLVE_TV_IRLS Iteratively Reweighted Least Squares inverse solver |
| inv_solve_TV_pdipm | INV_SOLVE_TV_PDIPM inverse solver for Andrea Borsic's |
| inv_solve_abs_GN_constrain | Do Gauss Netwon Method with barrier to ensure positvity of the con |
| inv_solve_abs_GN_prior | INV_SOLVE_ABS_GN_PRIOR inverse solver (WITH DIFFERENT PRIOR AT ITERATION!!!!!) |
| inv_solve_abs_annealingMetropolis_params | INV_SOLVE_ABS_ANNEALINGSIMPLEX_PARAMS absolute solver using the simplex annealing method. |
| inv_solve_abs_annealingSimplex_params | INV_SOLVE_ABS_ANNEALINGSIMPLEX_PARAMS absolute solver using the simplex annealing method. |
| inv_solve_abs_pdipm | INV_SOLVE_ABS_PDIPM inverse solver for absolute data using Primal/Dual interior point method |
| inv_solve_backproj | INV_SOLVE_BACKPROJ inverse solver using backprojection |
| inv_solve_cg | function img= inv_solve_cg( inv_model, data1); |
| inv_solve_conj_grad | INV_SOLVE_CONJ_GRAD inverse solver based on the CG |
| inv_solve_core | INV_SOLVE_CORE Solver using a generic iterative algorithm |
| inv_solve_diff_GN_one_step | INV_SOLVE_DIFF_GN_ONE_STEP inverse solver using approach of Adler&Guardo 1996 |
| inv_solve_diff_kalman | INV_SOLVE_DIFF_KALMAN inverse solver for difference EIT |
| inv_solve_diff_pdipm | INV_SOLVE_DIFF_PDIPM inverse solver for difference data using Primal/Dual interior point method |
| inv_solve_gn | function img= inv_solve_gn( inv_model, data1); |
| inv_solve_mcmc | NP_INV_SOLVE inverse solver for Nick Polydorides EIDORS3D code |
| inv_solve_time_prior | INV_SOLVE_TIME_PRIOR inverse solver to account for time differences |
| inv_solve_trunc_iterative | INV_SOLVE_TRUNC_ITERATIVE using Morozov truncated iteration |
| line_optimize | LINE_OPTIMIZE Cheap line optimizer |
| line_search_o2 | function [alpha, img, dv, opt] = line_search_o2(imgk, dx, data1, img1, N, W, hps2RtR, dv0, opt) |
| line_search_onm2 | function [alpha, img, dv, opt] = line_search_onm2(imgk, dx, data1, img1, N, W, hps2RtR, hpt2LLt, dv0, opt) |
| meas_icov_rm_elecs | MEAS_ICOV_RM_ELECS: remove electrodes from consideration |
| mk_GN_model | MK_GN_MODEL: make EIDORS inverse models using the GREIT approach |
| nodal_solve | NODAL_SOLVE inverse solver using approach of Adler&Guardo 1996 |
| primaldual_tvrecon_lsearch | [rs,x]=primaldual_tvrecon_lsearch(inv_mdl, vmeas, ... |
| prior_TV | PRIOR_TV calculate Total Variation image prior |
| prior_covar | PRIOR_COVAR image prior with distance-based interelement covar |
| prior_exponential_covar | PRIOR_EXPONENTIAL_COVAR image prior with exponential |
| prior_gaussian_HPF | PRIOR_GAUSSIAN_HPF calculate image prior |
| prior_gaussian_likelihood | Parameters for image |
| prior_laplace | PRIOR_LAPLACE calculate image prior |
| prior_laplace_old | PRIOR_LAPLACE calculate image prior |
| prior_movement | PRIOR_MOVEMENT calculate image prior |
| prior_noser | PRIOR_NOSER calculate image prior |
| prior_tikhonov | PRIOR_TIKHONOV calculate image prior |
| prior_time_smooth | PRIOR_TIME_SMOOTH calculate image prior |
| solve_use_matrix | SOLVE_USE_MATRIX solve using reconstruction matrix |
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